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Claude
ad8d0aa59b
12-document deep research set exploring whether RuVector v2.0.4 can serve as the substrate for a four-layer coherence-aware connectome operating system (CC-OS): connectome graph substrate, event-driven LIF dynamics runtime, embodied simulator closed loop, and ruvector-driven analysis + counterfactual perturbation. Positioning is deliberately narrow: not mind upload, not consciousness, not whole-brain emulation in the Sandberg-Bostrom sense. It is a graph-native, Rust-native, auditable platform for insect-scale connectome circuit science with built-in structural fragility scoring and witness-log reproducibility. Contents: - 00-index.md compendium index + positioning - 01-foundations-connectome-neuroscience published-literature survey - 02-connectome-graph-substrate Layer 1 schema + storage - 03-mincut-circuit-analysis ruvector-mincut on connectomes - 04-neural-dynamics-runtime Layer 2 LIF engine spec - 05-cross-region-attention-fusion NeuralFusionArray aggregate - 06-embodied-simulator-closed-loop Layer 3 Rapier + NMF bridge - 07-coherence-crv-behavioral-episodes BehaviorPipeline over CRV - 08-counterfactual-perturbation fragility protocol - 09-four-layer-architecture integrated system spec - 10-acceptance-test-grooming concrete pass/fail test - 11-risks-positioning-roadmap ADR-084..ADR-088 drafts Five ADRs are drafted inline for later extraction: ADR-084 Connectome graph substrate ADR-085 Neural dynamics runtime ADR-086 Embodied simulator closed loop ADR-087 CRV behavioral episodes + coherence gating ADR-088 Governance, positioning, counterfactual protocol No Rust source or Cargo files touched. No ADRs created yet - drafts only. Witness-bundle and test harness specifications reference the existing ADR-028 convention so downstream implementation slots cleanly into the existing tooling. https://claude.ai/code/session_017ePXU2EYqVPVSD8t7kEho5