mirror of
https://github.com/ruvnet/RuView
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d803bfe2b1
git-subtree-dir: vendor/ruvector git-subtree-split: b64c21726f2bb37286d9ee36a7869fef60cc6900
320 lines
9.0 KiB
Rust
320 lines
9.0 KiB
Rust
//! Graph Neural Network inference capabilities
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//!
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//! Provides GNN-based predictions: node classification, link prediction, graph embeddings.
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use crate::error::{GraphError, Result};
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use crate::types::{EdgeId, NodeId};
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use serde::{Deserialize, Serialize};
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use std::collections::HashMap;
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/// Configuration for GNN engine
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#[derive(Debug, Clone, Serialize, Deserialize)]
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pub struct GnnConfig {
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/// Number of GNN layers
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pub num_layers: usize,
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/// Hidden dimension size
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pub hidden_dim: usize,
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/// Aggregation method
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pub aggregation: AggregationType,
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/// Activation function
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pub activation: ActivationType,
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/// Dropout rate
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pub dropout: f32,
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}
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impl Default for GnnConfig {
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fn default() -> Self {
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Self {
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num_layers: 2,
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hidden_dim: 128,
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aggregation: AggregationType::Mean,
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activation: ActivationType::ReLU,
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dropout: 0.1,
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}
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}
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}
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/// Aggregation type for message passing
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#[derive(Debug, Clone, Copy, Serialize, Deserialize)]
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pub enum AggregationType {
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Mean,
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Sum,
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Max,
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Attention,
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}
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/// Activation function type
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#[derive(Debug, Clone, Copy, Serialize, Deserialize)]
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pub enum ActivationType {
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ReLU,
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Sigmoid,
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Tanh,
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GELU,
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}
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/// Graph Neural Network engine
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pub struct GraphNeuralEngine {
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config: GnnConfig,
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// In real implementation, would store model weights
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node_embeddings: HashMap<NodeId, Vec<f32>>,
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}
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impl GraphNeuralEngine {
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/// Create a new GNN engine
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pub fn new(config: GnnConfig) -> Self {
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Self {
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config,
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node_embeddings: HashMap::new(),
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}
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}
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/// Load pre-trained model weights
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pub fn load_model(&mut self, _model_path: &str) -> Result<()> {
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// Placeholder for model loading
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// Real implementation would:
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// 1. Load weights from file
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// 2. Initialize neural network layers
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// 3. Set up computation graph
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Ok(())
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}
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/// Classify a node based on its features and neighbors
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pub fn classify_node(&self, node_id: &NodeId, _features: &[f32]) -> Result<NodeClassification> {
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// Placeholder for GNN inference
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// Real implementation would:
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// 1. Gather neighbor features
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// 2. Apply message passing layers
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// 3. Aggregate neighbor information
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// 4. Compute final classification
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let class_probabilities = vec![0.7, 0.2, 0.1]; // Dummy probabilities
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let predicted_class = 0;
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Ok(NodeClassification {
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node_id: node_id.clone(),
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predicted_class,
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class_probabilities,
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confidence: 0.7,
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})
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}
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/// Predict likelihood of a link between two nodes
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pub fn predict_link(&self, node1: &NodeId, node2: &NodeId) -> Result<LinkPrediction> {
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// Placeholder for link prediction
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// Real implementation would:
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// 1. Get embeddings for both nodes
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// 2. Compute compatibility score (dot product, concat+MLP, etc.)
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// 3. Apply sigmoid for probability
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let score = 0.85; // Dummy score
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let exists = score > 0.5;
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Ok(LinkPrediction {
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node1: node1.clone(),
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node2: node2.clone(),
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score,
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exists,
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})
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}
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/// Generate embedding for entire graph or subgraph
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pub fn embed_graph(&self, node_ids: &[NodeId]) -> Result<GraphEmbedding> {
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// Placeholder for graph-level embedding
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// Real implementation would use graph pooling:
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// 1. Get node embeddings
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// 2. Apply pooling (mean, max, attention-based)
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// 3. Optionally apply final MLP
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let embedding = vec![0.0; self.config.hidden_dim];
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Ok(GraphEmbedding {
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embedding,
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node_count: node_ids.len(),
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method: "mean_pooling".to_string(),
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})
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}
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/// Update node embeddings using message passing
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pub fn update_embeddings(&mut self, graph_structure: &GraphStructure) -> Result<()> {
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// Placeholder for embedding update
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// Real implementation would:
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// 1. For each layer:
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// - Aggregate neighbor features
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// - Apply linear transformation
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// - Apply activation
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// 2. Store final embeddings
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for node_id in &graph_structure.nodes {
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let embedding = vec![0.0; self.config.hidden_dim];
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self.node_embeddings.insert(node_id.clone(), embedding);
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}
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Ok(())
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}
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/// Get embedding for a specific node
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pub fn get_node_embedding(&self, node_id: &NodeId) -> Option<&Vec<f32>> {
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self.node_embeddings.get(node_id)
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}
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/// Batch node classification
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pub fn classify_nodes_batch(
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&self,
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nodes: &[(NodeId, Vec<f32>)],
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) -> Result<Vec<NodeClassification>> {
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nodes
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.iter()
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.map(|(id, features)| self.classify_node(id, features))
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.collect()
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}
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/// Batch link prediction
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pub fn predict_links_batch(&self, pairs: &[(NodeId, NodeId)]) -> Result<Vec<LinkPrediction>> {
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pairs
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.iter()
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.map(|(n1, n2)| self.predict_link(n1, n2))
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.collect()
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}
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/// Apply attention mechanism for neighbor aggregation
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fn aggregate_with_attention(
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&self,
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_node_embedding: &[f32],
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_neighbor_embeddings: &[Vec<f32>],
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) -> Vec<f32> {
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// Placeholder for attention-based aggregation
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// Real implementation would compute attention weights
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vec![0.0; self.config.hidden_dim]
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}
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/// Apply activation function with numerical stability
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fn activate(&self, x: f32) -> f32 {
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match self.config.activation {
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ActivationType::ReLU => x.max(0.0),
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ActivationType::Sigmoid => {
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if x > 0.0 {
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1.0 / (1.0 + (-x).exp())
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} else {
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let ex = x.exp();
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ex / (1.0 + ex)
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}
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}
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ActivationType::Tanh => x.tanh(),
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ActivationType::GELU => {
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// Approximate GELU
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0.5 * x * (1.0 + (0.7978845608 * (x + 0.044715 * x.powi(3))).tanh())
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}
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}
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}
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}
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/// Result of node classification
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#[derive(Debug, Clone, Serialize, Deserialize)]
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pub struct NodeClassification {
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pub node_id: NodeId,
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pub predicted_class: usize,
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pub class_probabilities: Vec<f32>,
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pub confidence: f32,
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}
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/// Result of link prediction
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#[derive(Debug, Clone, Serialize, Deserialize)]
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pub struct LinkPrediction {
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pub node1: NodeId,
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pub node2: NodeId,
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pub score: f32,
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pub exists: bool,
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}
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/// Graph-level embedding
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#[derive(Debug, Clone, Serialize, Deserialize)]
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pub struct GraphEmbedding {
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pub embedding: Vec<f32>,
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pub node_count: usize,
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pub method: String,
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}
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/// Graph structure for GNN processing
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#[derive(Debug, Clone, Serialize, Deserialize)]
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pub struct GraphStructure {
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pub nodes: Vec<NodeId>,
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pub edges: Vec<(NodeId, NodeId)>,
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pub node_features: HashMap<NodeId, Vec<f32>>,
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}
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#[cfg(test)]
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mod tests {
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use super::*;
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#[test]
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fn test_gnn_engine_creation() {
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let config = GnnConfig::default();
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let _engine = GraphNeuralEngine::new(config);
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}
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#[test]
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fn test_node_classification() -> Result<()> {
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let engine = GraphNeuralEngine::new(GnnConfig::default());
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let features = vec![1.0, 0.5, 0.3];
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let result = engine.classify_node(&"node1".to_string(), &features)?;
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assert_eq!(result.node_id, "node1");
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assert!(result.confidence > 0.0);
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assert!(!result.class_probabilities.is_empty());
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Ok(())
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}
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#[test]
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fn test_link_prediction() -> Result<()> {
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let engine = GraphNeuralEngine::new(GnnConfig::default());
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let result = engine.predict_link(&"node1".to_string(), &"node2".to_string())?;
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assert_eq!(result.node1, "node1");
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assert_eq!(result.node2, "node2");
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assert!(result.score >= 0.0 && result.score <= 1.0);
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Ok(())
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}
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#[test]
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fn test_graph_embedding() -> Result<()> {
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let engine = GraphNeuralEngine::new(GnnConfig::default());
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let nodes = vec!["n1".to_string(), "n2".to_string(), "n3".to_string()];
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let embedding = engine.embed_graph(&nodes)?;
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assert_eq!(embedding.node_count, 3);
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assert_eq!(embedding.embedding.len(), 128);
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Ok(())
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}
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#[test]
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fn test_batch_classification() -> Result<()> {
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let engine = GraphNeuralEngine::new(GnnConfig::default());
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let nodes = vec![
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("n1".to_string(), vec![1.0, 0.0]),
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("n2".to_string(), vec![0.0, 1.0]),
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];
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let results = engine.classify_nodes_batch(&nodes)?;
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assert_eq!(results.len(), 2);
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Ok(())
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}
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#[test]
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fn test_activation_functions() {
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let engine = GraphNeuralEngine::new(GnnConfig {
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activation: ActivationType::ReLU,
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..Default::default()
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});
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assert_eq!(engine.activate(-1.0), 0.0);
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assert_eq!(engine.activate(1.0), 1.0);
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}
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}
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