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https://github.com/ruvnet/RuView
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rUv
f49c722764
The Rust port lived two directories deep (rust-port/wifi-densepose-rs/) without any sibling under rust-port/ that warranted the extra level. Move the whole workspace up to v2/ to match v1/ (Python) at the same depth and shorten every cd / build command across the repo. git mv preserves history for all tracked files. 60 files updated for path references (CI workflows, ADRs, docs, scripts, READMEs, internal .claude-flow state). Two manual fixes for relative-cd paths in CLAUDE.md and ADR-043 that became wrong after the depth change (cd ../.. → cd ..). Validated: - cargo check --workspace --no-default-features → clean (after target/ nuke; the gitignored target/ was carried by the OS rename and had hard-coded old paths in build scripts) - cargo test --workspace --no-default-features → 1,539 passed, 0 failed, 8 ignored (same totals as pre-rename) - ESP32-S3 on COM7 → still streaming live CSI (cb #40300, RSSI -64 dBm) After-merge follow-up: contributors should `rm -rf v2/target` once and let cargo regenerate from the new path.
104 lines
2.7 KiB
Rust
104 lines
2.7 KiB
Rust
//! Brain region and atlas types for parcellation.
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use serde::{Deserialize, Serialize};
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/// Brain atlas defining a parcellation scheme.
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#[derive(Debug, Clone, Copy, PartialEq, Eq, Hash, Serialize, Deserialize)]
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pub enum Atlas {
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/// Desikan-Killiany atlas (68 cortical regions).
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DesikanKilliany68,
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/// Destrieux atlas (148 cortical regions).
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Destrieux148,
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/// Schaefer 100-parcel atlas.
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Schaefer100,
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/// Schaefer 200-parcel atlas.
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Schaefer200,
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/// Schaefer 400-parcel atlas.
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Schaefer400,
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/// Custom atlas with a specified number of regions.
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Custom(usize),
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}
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impl Atlas {
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/// Number of regions in this atlas.
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pub fn num_regions(&self) -> usize {
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match self {
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Atlas::DesikanKilliany68 => 68,
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Atlas::Destrieux148 => 148,
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Atlas::Schaefer100 => 100,
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Atlas::Schaefer200 => 200,
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Atlas::Schaefer400 => 400,
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Atlas::Custom(n) => *n,
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}
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}
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}
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/// Cerebral hemisphere.
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#[derive(Debug, Clone, Copy, PartialEq, Eq, Hash, Serialize, Deserialize)]
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pub enum Hemisphere {
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Left,
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Right,
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Midline,
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}
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/// Brain lobe classification.
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#[derive(Debug, Clone, Copy, PartialEq, Eq, Hash, Serialize, Deserialize)]
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pub enum Lobe {
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Frontal,
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Parietal,
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Temporal,
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Occipital,
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Limbic,
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Subcortical,
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Cerebellar,
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}
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/// A single brain region (parcel) within an atlas.
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#[derive(Debug, Clone, Serialize, Deserialize)]
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pub struct BrainRegion {
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/// Region index within the atlas.
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pub id: usize,
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/// Human-readable name (e.g., "superiorfrontal").
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pub name: String,
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/// Hemisphere.
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pub hemisphere: Hemisphere,
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/// Lobe classification.
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pub lobe: Lobe,
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/// Centroid in MNI coordinates (x, y, z in mm).
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pub centroid: [f64; 3],
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}
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/// A full brain parcellation (atlas + all regions).
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#[derive(Debug, Clone, Serialize, Deserialize)]
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pub struct Parcellation {
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/// Atlas used.
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pub atlas: Atlas,
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/// All regions in the parcellation.
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pub regions: Vec<BrainRegion>,
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}
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impl Parcellation {
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/// Number of regions.
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pub fn num_regions(&self) -> usize {
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self.regions.len()
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}
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/// Get a region by its id.
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pub fn get_region(&self, id: usize) -> Option<&BrainRegion> {
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self.regions.iter().find(|r| r.id == id)
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}
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/// Get all regions in a given hemisphere.
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pub fn regions_in_hemisphere(&self, hemisphere: Hemisphere) -> Vec<&BrainRegion> {
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self.regions
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.iter()
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.filter(|r| r.hemisphere == hemisphere)
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.collect()
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}
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/// Get all regions in a given lobe.
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pub fn regions_in_lobe(&self, lobe: Lobe) -> Vec<&BrainRegion> {
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self.regions.iter().filter(|r| r.lobe == lobe).collect()
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}
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}
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